ProLego Protein as lego blocks ...

Protein Chain Browser  [Search with followings]

PDB id: [4 letter PDB Id] Chain [One letter Protein chain]
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Molecule: [Protein molecule containing the word as query]
Source: [Source organism of protein ]

Protein Chain List   [Click on contact String to explore] [chains: 25907]

pdbId Chain Residues Contact String Molecule Source
12AS A 327 Topology (PDB) Aspartate--ammonia ligase Escherichia coli
16PK A 415 Topology (PDB) Phosphoglycerate kinase, glycosomal Trypanosoma brucei
16VP A 311 Topology (PDB) Tegument protein VP16 Human alphaherpesvirus 1
1A0A A 63 Topology (PDB) Phosphate system positive regulatory protein PHO4 Saccharomyces cerevisiae
1A0C A 437 Topology (PDB) Xylose isomerase Thermoanaerobacterium thermosulfurigenes
1A0D A 437 Topology (PDB) Xylose isomerase Geobacillus stearothermophilus
1A0R P 188 Topology (PDB) Phosducin Bos taurus
1A0T P 413 Topology (PDB) Sucrose porin Salmonella enterica
1A12 A 401 Topology (PDB) Regulator of chromosome condensation Homo sapiens
1A14 L 104 Topology (PDB) Ig kappa chain V-V region HP 93G7 Mus musculus
1A17 A 159 Topology (PDB) Serine/threonine-protein phosphatase 5 Homo sapiens
1A1X A 106 Topology (PDB) Protein p13 MTCP-1 Homo sapiens
1A21 A 194 Topology (PDB) Tissue factor Oryctolagus cuniculus
1A25 A 132 Topology (PDB) Protein kinase C beta type Rattus norvegicus
1A2Y A 107 Topology (PDB) Ig kappa chain V-V region K2 Mus musculus
1A2Y B 116 Topology (PDB) Ig heavy chain V region PJ14 Mus musculus
1A2Z A 220 Topology (PDB) Pyrrolidone-carboxylate peptidase Thermococcus litoralis
1A32 A 85 Topology (PDB) 30S ribosomal protein S15 Geobacillus stearothermophilus
1A3A A 145 Topology (PDB) PTS system mannitol-specific EIICBA component Escherichia coli
1A3Q A 285 Topology (PDB) Nuclear factor NF-kappa-B p100 subunit Homo sapiens
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Above table lists all the available proteins in the ProLego database. Each protein chain (row in the table), has the link to corresponding PDB structure as well as the Topology link for detail analysis of proLeg-topologies. Table column heads can be read as following,

  • pdbId:  Protein Id [as from Protein Data Bank]
  • Chain:  Chain Id . as described in the PDB file
  • Residues:  Number of amino acid in the PDB chain.
  • Topology:  Link to explore topological representation of the protein
  • Molecule:  Protein molecule as described in the PDB. and Link to RCSB
  • Source:  Biological lsource of the proteins