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ProLego Protein as lego blocks ...
 

Protein Chain Browser  [Search with followings]

PDB id: [4 letter PDB Id] Chain [One letter Protein chain]
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Molecule: [Protein molecule containing the word as query]
Source: [Source organism of protein ]
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Protein Chain List   [Click on contact String to explore] [chains: 25880]

pdbId Chain Residues Contact String Molecule Source
4Y5Z 0 192 Topology (PDB) Coat protein Sesbania mosaic virus
2WZR 1 194 Topology (PDB) Genome polyprotein Foot-and-mouth disease virus
2ZZS 1 81 Topology (PDB) Cytochrome c554 Vibrio parahaemolyticus
3BJ9 1 116 Topology (PDB) Immunoglobulin iota chain Homo sapiens
3MI0 1 215 Topology (PDB) Proteasome subunit alpha Mycobacterium tuberculosis
3UNB 1 201 Topology (PDB) Proteasome subunit beta type-5 Mus musculus
3ZPV 1 62 Topology (PDB) Protein pygopus Drosophila melanogaster
4C2M 1 44 Topology (PDB) DNA-directed RNA polymerases I, II, and III subunit RPABC4 Saccharomyces cerevisiae
4GB3 1 273 Topology (PDB) Genome polyprotein Enterovirus B
4N8X 1 99 Topology (PDB) Carbon dioxide concentrating mechanism protein Nostoc sp. PCC 7120
4Q4W 1 281 Topology (PDB) Genome polyprotein Enterovirus C
4R3O 1 213 Topology (PDB) Proteasome subunit beta type-1 Homo sapiens
4RGZ 1 367 Topology (PDB) Xaa-Pro aminopeptidase Thermococcus sibiricus
4RKU 1 171 Topology (PDB) AT3g54890 Pisum sativum
4XK8 1 195 Topology (PDB) Chlorophyll a-b binding protein 6, chloroplastic Arabidopsis thaliana
4Y28 1 194 Topology (PDB) AT3g54890 Pisum sativum
5L8R 1 193 Topology (PDB) AT3g54890 Pisum sativum
5UN0 1 236 Topology (PDB) Carboxylate--amine ligase Mycobacterium tuberculosis
1AYM 1 285 Topology (PDB) Genome polyprotein Human rhinovirus sp.
1BVP 1 349 Topology (PDB) Core protein VP7 Bluetongue virus
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Above table lists all the available proteins in the ProLego database. Each protein chain (row in the table), has the link to corresponding PDB structure as well as the Topology link for detail analysis of proLeg-topologies. Table column heads can be read as following,

  • pdbId:  Protein Id [as from Protein Data Bank]
  • Chain:  Chain Id . as described in the PDB file
  • Residues:  Number of amino acid in the PDB chain.
  • Topology:  Link to explore topological representation of the protein
  • Molecule:  Protein molecule as described in the PDB. and Link to RCSB
  • Source:  Biological lsource of the proteins