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ProLego Protein as lego blocks ...
 

Protein Domain Browser   [Search with followings]

Domain Id Database [Astral/CATH]
Residue >=
Residue <=
Molecule: [Protein molecule containing the word as query]
Source: [Source organism of protein ]
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Protein Domain List   [Click on contact String to explore]

Db Source domId Structure Class Residues Contact String Molecule Source
CATH 3.5 1g3jD00 34 see topology Transcription factor 7-like 1-A Xenopus laevis
CATH 3.5 1aoyA00 1.10.10.10 78 see topology Arginine repressor Escherichia coli
CATH 3.5 1bbyA00 1.10.10.10 69 see topology General transcription factor IIF subunit 2 Homo sapiens
CATH 3.5 1bjaA00 1.10.10.10 95 see topology Middle transcription regulatory protein motA Enterobacteria phage T4 sensu lato
CATH 3.5 1bm9A00 1.10.10.10 120 see topology Replication termination protein Bacillus subtilis
CATH 3.5 1cf7A00 1.10.10.10 67 see topology Transcription factor E2F4 Homo sapiens
CATH 3.5 1cf7B00 1.10.10.10 82 see topology Transcription factor Dp-2 Homo sapiens
CATH 3.5 1d8jA00 1.10.10.10 81 see topology Transcription initiation factor IIE subunit beta Homo sapiens
CATH 3.5 1aoyA00 1.10.10.10 78 see topology Arginine repressor Escherichia coli
CATH 3.5 1bbyA00 1.10.10.10 69 see topology General transcription factor IIF subunit 2 Homo sapiens
CATH 3.5 1bjaA00 1.10.10.10 95 see topology Middle transcription regulatory protein motA Enterobacteria phage T4 sensu lato
CATH 3.5 1bm9A00 1.10.10.10 120 see topology Replication termination protein Bacillus subtilis
CATH 3.5 1cf7A00 1.10.10.10 67 see topology Transcription factor E2F4 Homo sapiens
CATH 3.5 1cf7B00 1.10.10.10 82 see topology Transcription factor Dp-2 Homo sapiens
CATH 3.5 1d8jA00 1.10.10.10 81 see topology Transcription initiation factor IIE subunit beta Homo sapiens
CATH 3.5 1dp7P00 1.10.10.10 76 see topology MHC class II regulatory factor RFX1 Homo sapiens
CATH 3.5 1dpuA00 1.10.10.10 69 see topology Replication protein A 32 kDa subunit Homo sapiens
CATH 3.5 1duxC00 1.10.10.10 86 see topology ETS domain-containing protein Elk-1 Homo sapiens
CATH 3.5 1fc3B00 1.10.10.10 101 see topology Stage 0 sporulation protein A Geobacillus stearothermophilus
CATH 3.5 1fseB00 1.10.10.10 70 see topology Spore germination protein GerE Bacillus subtilis
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Above table lists all the available domains in the ProLego database, from CATH and SCOP database. Each domain (row in the table), has the link to corresponding domain structure as well as the Topology link for detail analysis of proLeg-topologies. Table column heads can be read as following,

  • Db Source:  CATH (v. CATH_4.1) or SCOP (ASTRAL_30)
  • domId:  Domain Identity as provided by respective databases
  • Structure Class: Structure Classification string as provided by individual database.
  • Residues:  Number of amino acids (or residues) in the domain.
  • Contact String:  Link to explore the prolego topology present in that domain
  • Source:  Biological lsource of the proteins