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ProLego Protein as lego blocks ...
 

Protein Domain Browser   [Search with followings]

Domain Id Database [Astral/CATH]
Residue >=
Residue <=
Molecule: [Protein molecule containing the word as query]
Source: [Source organism of protein ]
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Protein Domain List   [Click on contact String to explore]

Db Source domId Structure Class Residues Contact String Molecule Source
ASTRAL-1.75B d1cxxa2 g.39.1.3 31 see topology u'Cysteine and glycine-rich protein 2' Coturnix japonica
ASTRAL-1.75B d1pnha_ g.3.7.2 31 see topology u'Potassium channel toxin alpha-KTx 5.2' Androctonus mauritanicus
ASTRAL-1.75B d1pvza_ g.3.7.2 31 see topology u'Potassium channel toxin alpha-KTx 14.2' Mesobuthus martensii
ASTRAL-1.75B d1rutx3 g.39.1.3 31 see topology u'LIM domain-binding protein 1' Mus musculus
ASTRAL-1.75B d1tf3a1 g.37.1.1 31 see topology u'Transcription factor IIIA' Xenopus laevis
ASTRAL-1.75B d1tf3a3 g.37.1.1 31 see topology u'Transcription factor IIIA' Xenopus laevis
ASTRAL-1.75B d1u5sb1 g.39.1.3 31 see topology u'LIM and senescent cell antigen-like-containing domain protein 1' Homo sapiens
ASTRAL-1.75B d1u85a1 g.37.1.1 31 see topology u'Krueppel-like factor 3' Mus musculus
ASTRAL-1.75B d1x62a1 g.39.1.3 31 see topology u'PDZ and LIM domain protein 1' Homo sapiens
ASTRAL-1.75B d2cupa2 g.39.1.3 31 see topology u'Four and a half LIM domains protein 1' Homo sapiens
ASTRAL-1.75B d2dj7a1 g.39.1.3 31 see topology u'Actin-binding LIM protein 3' Homo sapiens
ASTRAL-1.75B d2glia4 g.37.1.1 31 see topology u'Zinc finger protein GLI1' Homo sapiens
CATH 3.5 2gliA04 3.30.160.60 31 see topology Zinc finger protein GLI1 Homo sapiens
ASTRAL-1.75B d1clvi_ g.3.2.1 32 see topology u'Alpha-amylase inhibitor AAI' Amaranthus hypochondriacus
ASTRAL-1.75B d1ewsa_ g.9.1.1 32 see topology u'Corticostatin-related peptide RK-1' Oryctolagus cuniculus
ASTRAL-1.75B d1gl0i_ g.4.1.1 32 see topology u'Protease inhibitors' Locusta migratoria
ASTRAL-1.75B d1x3ha2 g.39.1.3 32 see topology u'Leupaxin' Homo sapiens
ASTRAL-1.75B d1x4ka1 g.39.1.3 32 see topology u'Four and a half LIM domains protein 2' Homo sapiens
ASTRAL-1.75B d1x61a2 g.39.1.3 32 see topology u'Thyroid receptor-interacting protein 6' Homo sapiens
ASTRAL-1.75B d2cuqa1 g.39.1.3 32 see topology u'Four and a half LIM domains protein 3' Homo sapiens
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Above table lists all the available domains in the ProLego database, from CATH and SCOP database. Each domain (row in the table), has the link to corresponding domain structure as well as the Topology link for detail analysis of proLeg-topologies. Table column heads can be read as following,

  • Db Source:  CATH (v. CATH_4.1) or SCOP (ASTRAL_30)
  • domId:  Domain Identity as provided by respective databases
  • Structure Class: Structure Classification string as provided by individual database.
  • Residues:  Number of amino acids (or residues) in the domain.
  • Contact String:  Link to explore the prolego topology present in that domain
  • Source:  Biological lsource of the proteins